Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL138918.1-201ENST00000568306 659 ntBASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 RARRES2P8-201ENST00000566335 367 ntBASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 C20orf181-201ENST00000623918 480 ntBASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 AL592424.1-201ENST00000563624 1536 ntBASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.37■□□□□ 0.53
BLOC1S4Q9NUP1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms