Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRCC1Q9NPI7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRCC1Q9NPI7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.29■□□□□ 0.04
KRCC1Q9NPI7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
KRCC1Q9NPI7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AC046158.3-201ENST00000624947 2558 ntBASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AC132008.2-207ENST00000454517 770 ntBASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AC139887.3-201ENST00000568585 713 ntBASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 MPDU1-223ENST00000582151 728 ntBASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AP001269.4-201ENST00000609611 512 ntBASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRCC1Q9NPI7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 TSPY26P-202ENST00000565928 3884 ntBASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 KRT8P39-201ENST00000396270 1433 ntBASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 POU5F1P6-201ENST00000466990 990 ntBASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 AC092119.3-201ENST00000612618 583 ntBASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRCC1Q9NPI7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRCC1Q9NPI7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms