Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 HMGA1P7-201ENST00000406908 502 ntBASIC14.2□□□□□ -0.14
GCM1Q9NP62 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 BX842568.4-201ENST00000421222 227 ntBASIC14.2□□□□□ -0.14
GCM1Q9NP62 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 AC124067.4-201ENST00000519691 2379 ntBASIC14.2□□□□□ -0.14
GCM1Q9NP62 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 AC022211.2-201ENST00000585075 2527 ntBASIC14.2□□□□□ -0.14
GCM1Q9NP62 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 AL391256.1-201ENST00000443260 1855 ntBASIC14.2□□□□□ -0.14
GCM1Q9NP62 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 AC067930.6-201ENST00000623257 4947 ntBASIC14.19□□□□□ -0.14
GCM1Q9NP62 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 AD000864.1-201ENST00000624076 2295 ntBASIC14.19□□□□□ -0.14
GCM1Q9NP62 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 YBX2P1-201ENST00000394192 760 ntBASIC14.19□□□□□ -0.14
GCM1Q9NP62 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 DNAJB3-201ENST00000446806 729 ntBASIC14.19□□□□□ -0.14
GCM1Q9NP62 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 CYP2A7P1-201ENST00000595391 815 ntBASIC14.19□□□□□ -0.14
GCM1Q9NP62 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
GCM1Q9NP62 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GCM1Q9NP62 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms