Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 LINC00552-201ENST00000625151 2579 ntBASIC13.49□□□□□ -0.25
NKX6-2Q9C056 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 SSR4P1-203ENST00000599569 2260 ntBASIC13.48□□□□□ -0.25
NKX6-2Q9C056 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AL353719.1-201ENST00000566847 864 ntBASIC13.48□□□□□ -0.25
NKX6-2Q9C056 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 CR383656.2-201ENST00000548656 2254 ntBASIC13.48□□□□□ -0.25
NKX6-2Q9C056 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-2Q9C056 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms