Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPN18Q99952 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PTPN18Q99952 AC103810.3-201ENST00000583567 96 ntBASIC18.74■□□□□ 0.59
PTPN18Q99952 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPN18Q99952 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PTPN18Q99952 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 AL136982.4-201ENST00000437689 1740 ntBASIC18.74■□□□□ 0.59
PTPN18Q99952 KRT8P22-201ENST00000562317 1415 ntBASIC18.74■□□□□ 0.59
PTPN18Q99952 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN18Q99952 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTPN18Q99952 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTPN18Q99952 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PTPN18Q99952 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTPN18Q99952 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PTPN18Q99952 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN18Q99952 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 FO393414.2-201ENST00000405153 598 ntBASIC18.73■□□□□ 0.59
PTPN18Q99952 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.73■□□□□ 0.59
PTPN18Q99952 AC099548.2-209ENST00000480264 625 ntBASIC18.73■□□□□ 0.59
PTPN18Q99952 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PTPN18Q99952 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN18Q99952 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.73■□□□□ 0.59
PTPN18Q99952 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PTPN18Q99952 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTPN18Q99952 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN18Q99952 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PTPN18Q99952 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTPN18Q99952 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN18Q99952 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN18Q99952 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PTPN18Q99952 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PTPN18Q99952 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN18Q99952 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPN18Q99952 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.72■□□□□ 0.59
PTPN18Q99952 ZNF767P-206ENST00000513792 565 ntBASIC18.72■□□□□ 0.59
PTPN18Q99952 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPN18Q99952 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPN18Q99952 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPN18Q99952 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.72■□□□□ 0.59
PTPN18Q99952 CU634019.7-201ENST00000624153 1185 ntBASIC18.72■□□□□ 0.59
PTPN18Q99952 FP236241.2-201ENST00000624906 1185 ntBASIC18.72■□□□□ 0.59
PTPN18Q99952 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PTPN18Q99952 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN18Q99952 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN18Q99952 AC008764.6-201ENST00000595909 2069 ntBASIC18.72■□□□□ 0.59
PTPN18Q99952 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PTPN18Q99952 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN18Q99952 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN18Q99952 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN18Q99952 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTPN18Q99952 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPN18Q99952 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN18Q99952 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN18Q99952 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PTPN18Q99952 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN18Q99952 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PTPN18Q99952 AC005229.1-201ENST00000392885 409 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPN18Q99952 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPN18Q99952 BCRP2-202ENST00000447763 634 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 FO681548.1-201ENST00000455617 1132 ntBASIC18.71■□□□□ 0.59
PTPN18Q99952 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms