Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CCL13Q99616 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CCL13Q99616 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL13Q99616 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL13Q99616 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCL13Q99616 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL13Q99616 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL13Q99616 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL13Q99616 DNAJB3-201ENST00000446806 729 ntBASIC13.9□□□□□ -0.18
CCL13Q99616 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL13Q99616 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.9□□□□□ -0.18
CCL13Q99616 AC010327.4-202ENST00000591484 748 ntBASIC13.9□□□□□ -0.18
CCL13Q99616 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CCL13Q99616 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.9□□□□□ -0.18
CCL13Q99616 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCL13Q99616 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.9□□□□□ -0.18
CCL13Q99616 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.9□□□□□ -0.19
CCL13Q99616 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.9□□□□□ -0.19
CCL13Q99616 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CCL13Q99616 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CCL13Q99616 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CCL13Q99616 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 AL031731.1-201ENST00000642131 2094 ntBASIC13.89□□□□□ -0.19
CCL13Q99616 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL13Q99616 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCL13Q99616 AC084018.2-201ENST00000613093 2607 ntBASIC13.89□□□□□ -0.19
CCL13Q99616 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CCL13Q99616 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL13Q99616 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 AC092474.2-201ENST00000424288 719 ntBASIC13.89□□□□□ -0.19
CCL13Q99616 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL13Q99616 MIR3687-2-201ENST00000577708 61 ntBASIC13.89□□□□□ -0.19
CCL13Q99616 MIR3687-1-201ENST00000614492 61 ntBASIC13.89□□□□□ -0.19
CCL13Q99616 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.89□□□□□ -0.19
CCL13Q99616 C20orf181-201ENST00000623918 480 ntBASIC13.89□□□□□ -0.19
CCL13Q99616 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCL13Q99616 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CCL13Q99616 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL13Q99616 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCL13Q99616 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCL13Q99616 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL13Q99616 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CCL13Q99616 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CCL13Q99616 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCL13Q99616 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL13Q99616 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCL13Q99616 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CCL13Q99616 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL13Q99616 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL13Q99616 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL13Q99616 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL13Q99616 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms