Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 AC060766.1-201ENST00000590824 627 ntBASIC16.77■□□□□ 0.28
PHOX2BQ99453 AL021578.1-201ENST00000613646 709 ntBASIC16.77■□□□□ 0.28
PHOX2BQ99453 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.77■□□□□ 0.27
PHOX2BQ99453 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PHOX2BQ99453 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.77■□□□□ 0.27
PHOX2BQ99453 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PHOX2BQ99453 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PHOX2BQ99453 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.77■□□□□ 0.27
PHOX2BQ99453 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PHOX2BQ99453 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PHOX2BQ99453 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PHOX2BQ99453 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.27
PHOX2BQ99453 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PHOX2BQ99453 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 AC093525.8-201ENST00000624099 1342 ntBASIC16.76■□□□□ 0.27
PHOX2BQ99453 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 FXNP2-201ENST00000411625 547 ntBASIC16.76■□□□□ 0.27
PHOX2BQ99453 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 SPDYE18-201ENST00000510091 1050 ntBASIC16.76■□□□□ 0.27
PHOX2BQ99453 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 AC079328.1-201ENST00000560358 952 ntBASIC16.76■□□□□ 0.27
PHOX2BQ99453 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 PHGDH-209ENST00000641074 1780 ntBASIC16.76■□□□□ 0.27
PHOX2BQ99453 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHOX2BQ99453 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PHOX2BQ99453 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.75■□□□□ 0.27
PHOX2BQ99453 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 AC093004.1-201ENST00000508850 424 ntBASIC16.75■□□□□ 0.27
PHOX2BQ99453 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.75■□□□□ 0.27
PHOX2BQ99453 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHOX2BQ99453 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms