Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ME2P1-201ENST00000426028 1970 ntBASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 AC012313.1-201ENST00000593393 3059 ntBASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 PIN1P1-201ENST00000412108 996 ntBASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 AC114501.2-201ENST00000439631 535 ntBASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 AC239800.4-201ENST00000603712 296 ntBASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 ALOX12P2-203ENST00000570921 1945 ntBASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP2Q96SN8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 POU5F1P6-201ENST00000466990 990 ntBASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 AC004461.2-201ENST00000629517 803 ntBASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.22■□□□□ 0.67
CDK5RAP2Q96SN8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 AL139010.1-201ENST00000454878 894 ntBASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 AC023310.3-201ENST00000557027 670 ntBASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 AC100756.1-201ENST00000562736 682 ntBASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 AC138749.3-201ENST00000567691 622 ntBASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 AC116165.1-201ENST00000611806 668 ntBASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 AL033527.5-202ENST00000641632 1098 ntBASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 AC106886.4-201ENST00000623557 2502 ntBASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDK5RAP2Q96SN8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CDK5RAP2Q96SN8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms