Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 FOSL1P1-201ENST00000511041 816 ntBASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 SART3-203ENST00000546611 1184 ntBASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 AL136379.1-201ENST00000623471 2642 ntBASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 PPT1-215ENST00000641471 2368 ntBASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 KRT8P39-201ENST00000396270 1433 ntBASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 PTCHD3P3-201ENST00000403073 906 ntBASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 AL139424.1-201ENST00000607572 797 ntBASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 LINC02447-202ENST00000501888 2146 ntBASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CHAMP1Q96JM3 TNRC18P2-201ENST00000417666 2714 ntBASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 PRYP5-201ENST00000451909 266 ntBASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHAMP1Q96JM3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms