Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 PRYP5-201ENST00000451909 266 ntBASIC15.83■□□□□ 0.12
LRRC58Q96CX6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 AL121956.5-201ENST00000625261 221 ntBASIC15.83■□□□□ 0.12
LRRC58Q96CX6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 AC005332.1-201ENST00000577698 1310 ntBASIC15.83■□□□□ 0.12
LRRC58Q96CX6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.83■□□□□ 0.12
LRRC58Q96CX6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 GPAA1P2-202ENST00000606848 1787 ntBASIC15.82■□□□□ 0.12
LRRC58Q96CX6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 AP002383.4-201ENST00000442518 975 ntBASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.82■□□□□ 0.12
LRRC58Q96CX6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 AC073347.1-201ENST00000421633 2643 ntBASIC15.82■□□□□ 0.12
LRRC58Q96CX6 AC092850.2-201ENST00000623821 2697 ntBASIC15.82■□□□□ 0.12
LRRC58Q96CX6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC58Q96CX6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 AL031133.1-201ENST00000406807 723 ntBASIC15.81■□□□□ 0.12
LRRC58Q96CX6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 NCF1C-201ENST00000438382 1427 ntBASIC15.81■□□□□ 0.12
LRRC58Q96CX6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 AC064862.7-201ENST00000604520 867 ntBASIC15.81■□□□□ 0.12
LRRC58Q96CX6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC58Q96CX6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms