Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 AC023141.13-201ENST00000604991 943 ntBASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 AC020765.3-201ENST00000613051 740 ntBASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 AC004877.2-201ENST00000623941 599 ntBASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 AC025580.3-201ENST00000617932 1424 ntBASIC17.12■□□□□ 0.33
PCDH19Q8TAB3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 PCDHA1-201ENST00000378133 2726 ntBASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 PMS2P4-201ENST00000412466 1052 ntBASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 RNA5SP416-201ENST00000516838 111 ntBASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 AC021097.1-201ENST00000607902 574 ntBASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 AC007064.4-201ENST00000637740 555 ntBASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 AL513523.2-202ENST00000427283 2040 ntBASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH19Q8TAB3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms