Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 FAM58CP-201ENST00000435741 640 ntBASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 MKNK2P1-201ENST00000437526 628 ntBASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 KRT18P34-201ENST00000488218 1270 ntBASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 FAM86C2P-203ENST00000528684 1004 ntBASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 AP002472.1-201ENST00000577490 586 ntBASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB42Q8N4Z0 AL671710.1-201ENST00000610245 2349 ntBASIC16.14■□□□□ 0.18
RAB42Q8N4Z0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
RAB42Q8N4Z0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 YBX2P1-201ENST00000394192 760 ntBASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 AC092474.2-201ENST00000424288 719 ntBASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 AC092865.5-201ENST00000545435 363 ntBASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 AC091812.2-201ENST00000619081 385 ntBASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 RNF216P1-203ENST00000404404 2427 ntBASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB42Q8N4Z0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 SNX33P1-201ENST00000592116 1762 ntBASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.13■□□□□ 0.17
RAB42Q8N4Z0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms