Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 Z99916.2-201ENST00000604037 246 ntBASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 AC097637.2-201ENST00000624096 1997 ntBASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 COX5BP2-201ENST00000392354 334 ntBASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 AL512604.3-201ENST00000569583 964 ntBASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 AC069224.1-201ENST00000566372 1715 ntBASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD2Q8IV50 AL390755.1-201ENST00000623716 2027 ntBASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms