Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 ABCD1P5-201ENST00000445663 754 ntBASIC14.84□□□□□ -0.03
LRRC28Q86X40 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 IGHV3-52-201ENST00000519770 353 ntBASIC14.84□□□□□ -0.03
LRRC28Q86X40 AL160237.2-201ENST00000556165 472 ntBASIC14.84□□□□□ -0.03
LRRC28Q86X40 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 AC104692.2-201ENST00000603054 253 ntBASIC14.84□□□□□ -0.03
LRRC28Q86X40 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 AC010460.3-201ENST00000511359 1579 ntBASIC14.84□□□□□ -0.03
LRRC28Q86X40 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRRC28Q86X40 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.83□□□□□ -0.03
LRRC28Q86X40 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.83□□□□□ -0.03
LRRC28Q86X40 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.83□□□□□ -0.03
LRRC28Q86X40 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRC28Q86X40 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRC28Q86X40 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.83□□□□□ -0.03
LRRC28Q86X40 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 RBM17P3-201ENST00000417687 1192 ntBASIC14.83□□□□□ -0.04
LRRC28Q86X40 AC103564.2-201ENST00000432853 1299 ntBASIC14.83□□□□□ -0.04
LRRC28Q86X40 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 AC106795.1-205ENST00000512851 1056 ntBASIC14.83□□□□□ -0.04
LRRC28Q86X40 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 AL031008.1-201ENST00000619963 541 ntBASIC14.83□□□□□ -0.04
LRRC28Q86X40 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
LRRC28Q86X40 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRC28Q86X40 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AC079781.3-201ENST00000449110 356 ntBASIC14.82□□□□□ -0.04
LRRC28Q86X40 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 HLA-J-202ENST00000469281 1241 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms