Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 AC122714.2-201ENST00000502787 707 ntBASIC15.39■□□□□ 0.05
TUBA1AQ71U36 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 AF238378.1-201ENST00000526806 358 ntBASIC15.39■□□□□ 0.05
TUBA1AQ71U36 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 REXO1L6P-202ENST00000619970 1078 ntBASIC15.39■□□□□ 0.05
TUBA1AQ71U36 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 KRT8P10-201ENST00000450021 1447 ntBASIC15.39■□□□□ 0.05
TUBA1AQ71U36 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBA1AQ71U36 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 AC004870.1-201ENST00000315132 882 ntBASIC15.38■□□□□ 0.05
TUBA1AQ71U36 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 AC079781.3-201ENST00000449110 356 ntBASIC15.38■□□□□ 0.05
TUBA1AQ71U36 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 AC008608.2-201ENST00000606089 416 ntBASIC15.38■□□□□ 0.05
TUBA1AQ71U36 AC019129.2-201ENST00000609837 1235 ntBASIC15.38■□□□□ 0.05
TUBA1AQ71U36 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 FAM45BP-202ENST00000592932 1624 ntBASIC15.38■□□□□ 0.05
TUBA1AQ71U36 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBA1AQ71U36 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 ABCD1P5-201ENST00000445663 754 ntBASIC15.37■□□□□ 0.05
TUBA1AQ71U36 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 SAPCD2P3-201ENST00000455031 850 ntBASIC15.37■□□□□ 0.05
TUBA1AQ71U36 AP002490.2-201ENST00000524791 560 ntBASIC15.37■□□□□ 0.05
TUBA1AQ71U36 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 MTDHP3-201ENST00000594186 672 ntBASIC15.37■□□□□ 0.05
TUBA1AQ71U36 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBA1AQ71U36 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms