Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 CYP2A7P1-201ENST00000595391 815 ntBASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 AL078644.1-201ENST00000609881 752 ntBASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC39BQ5VTQ0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 ELL2P1-201ENST00000413990 1906 ntBASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 RNU1-129P-201ENST00000384064 167 ntBASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 PMS2P4-201ENST00000412466 1052 ntBASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 U1.21-201ENST00000580816 167 ntBASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 AC139530.3-201ENST00000620344 690 ntBASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 AC026691.1-201ENST00000602502 2017 ntBASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC39BQ5VTQ0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 AL031055.1-201ENST00000606362 631 ntBASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 AL161645.1-201ENST00000622716 1255 ntBASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 AC092919.2-201ENST00000623631 1645 ntBASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 AC006277.1-201ENST00000624348 1610 ntBASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC39BQ5VTQ0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC39BQ5VTQ0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.27■□□□□ 0.35
TTC39BQ5VTQ0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.27■□□□□ 0.35
TTC39BQ5VTQ0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
TTC39BQ5VTQ0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TTC39BQ5VTQ0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TTC39BQ5VTQ0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.27■□□□□ 0.35
TTC39BQ5VTQ0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms