Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 NCF1C-201ENST00000438382 1427 ntBASIC16.79■□□□□ 0.28
LGSNQ5TDP6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 AC024909.3-201ENST00000611513 2257 ntBASIC16.79■□□□□ 0.28
LGSNQ5TDP6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 POU5F1P6-201ENST00000466990 990 ntBASIC16.79■□□□□ 0.28
LGSNQ5TDP6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.79■□□□□ 0.28
LGSNQ5TDP6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGSNQ5TDP6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 FAM86EP-206ENST00000510506 987 ntBASIC16.78■□□□□ 0.28
LGSNQ5TDP6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 MIR5100-201ENST00000579544 119 ntBASIC16.78■□□□□ 0.28
LGSNQ5TDP6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 AL603832.2-201ENST00000566195 2125 ntBASIC16.78■□□□□ 0.28
LGSNQ5TDP6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LGSNQ5TDP6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 AL512652.2-201ENST00000625156 1716 ntBASIC16.77■□□□□ 0.28
LGSNQ5TDP6 LINC01144-201ENST00000626198 1710 ntBASIC16.77■□□□□ 0.28
LGSNQ5TDP6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 MPDU1-223ENST00000582151 728 ntBASIC16.77■□□□□ 0.28
LGSNQ5TDP6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
LGSNQ5TDP6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms