Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 AL391005.1-201ENST00000623953 2435 ntBASIC16.18■□□□□ 0.18
SGO1Q5FBB7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 TSPY26P-202ENST00000565928 3884 ntBASIC16.17■□□□□ 0.18
SGO1Q5FBB7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 HNRNPDP1-201ENST00000439535 754 ntBASIC16.17■□□□□ 0.18
SGO1Q5FBB7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 SNX33P1-201ENST00000592116 1762 ntBASIC16.17■□□□□ 0.18
SGO1Q5FBB7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 AC026691.1-201ENST00000602502 2017 ntBASIC16.17■□□□□ 0.18
SGO1Q5FBB7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.17■□□□□ 0.18
SGO1Q5FBB7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 CICP6-201ENST00000457191 2729 ntBASIC16.17■□□□□ 0.18
SGO1Q5FBB7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.17■□□□□ 0.18
SGO1Q5FBB7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms