Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTRA3P83110 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HTRA3P83110 AC015818.8-201ENST00000587907 1519 ntBASIC18.9■□□□□ 0.62
HTRA3P83110 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
HTRA3P83110 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HTRA3P83110 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HTRA3P83110 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.89■□□□□ 0.61
HTRA3P83110 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.89■□□□□ 0.61
HTRA3P83110 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HTRA3P83110 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.89■□□□□ 0.61
HTRA3P83110 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 NKAIN1P1-201ENST00000435754 582 ntBASIC18.89■□□□□ 0.61
HTRA3P83110 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.89■□□□□ 0.61
HTRA3P83110 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.89■□□□□ 0.61
HTRA3P83110 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.89■□□□□ 0.61
HTRA3P83110 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HTRA3P83110 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.89■□□□□ 0.61
HTRA3P83110 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.89■□□□□ 0.61
HTRA3P83110 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.89■□□□□ 0.61
HTRA3P83110 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.89■□□□□ 0.61
HTRA3P83110 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.89■□□□□ 0.61
HTRA3P83110 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTRA3P83110 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HTRA3P83110 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.88■□□□□ 0.61
HTRA3P83110 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.88■□□□□ 0.61
HTRA3P83110 AL139010.1-201ENST00000454878 894 ntBASIC18.88■□□□□ 0.61
HTRA3P83110 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.88■□□□□ 0.61
HTRA3P83110 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.88■□□□□ 0.61
HTRA3P83110 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.88■□□□□ 0.61
HTRA3P83110 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.88■□□□□ 0.61
HTRA3P83110 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.88■□□□□ 0.61
HTRA3P83110 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.88■□□□□ 0.61
HTRA3P83110 AC145423.3-201ENST00000615987 467 ntBASIC18.88■□□□□ 0.61
HTRA3P83110 AC138951.2-201ENST00000623455 1161 ntBASIC18.88■□□□□ 0.61
HTRA3P83110 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.88■□□□□ 0.61
HTRA3P83110 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.88■□□□□ 0.61
HTRA3P83110 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.88■□□□□ 0.61
HTRA3P83110 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.88■□□□□ 0.61
HTRA3P83110 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.88■□□□□ 0.61
HTRA3P83110 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.88■□□□□ 0.61
HTRA3P83110 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
HTRA3P83110 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTRA3P83110 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.87■□□□□ 0.61
HTRA3P83110 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.87■□□□□ 0.61
HTRA3P83110 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.87■□□□□ 0.61
HTRA3P83110 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HTRA3P83110 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.87■□□□□ 0.61
HTRA3P83110 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HTRA3P83110 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.87■□□□□ 0.61
HTRA3P83110 Z97180.1-201ENST00000445173 988 ntBASIC18.87■□□□□ 0.61
HTRA3P83110 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.87■□□□□ 0.61
HTRA3P83110 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.87■□□□□ 0.61
HTRA3P83110 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.87■□□□□ 0.61
HTRA3P83110 AC120045.2-201ENST00000567334 178 ntBASIC18.87■□□□□ 0.61
HTRA3P83110 AP001063.1-201ENST00000568332 529 ntBASIC18.87■□□□□ 0.61
HTRA3P83110 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HTRA3P83110 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HTRA3P83110 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HTRA3P83110 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.87■□□□□ 0.61
HTRA3P83110 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.87■□□□□ 0.61
HTRA3P83110 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA3P83110 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA3P83110 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HTRA3P83110 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA3P83110 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.86■□□□□ 0.61
HTRA3P83110 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HTRA3P83110 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA3P83110 AL589702.1-201ENST00000641229 1509 ntBASIC18.86■□□□□ 0.61
HTRA3P83110 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 MIR1202-201ENST00000408529 83 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms