Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.29■□□□□ 0.68
IRX3P78415 MIR4492-201ENST00000581627 80 ntBASIC19.29■□□□□ 0.68
IRX3P78415 AC073389.1-201ENST00000595595 795 ntBASIC19.29■□□□□ 0.68
IRX3P78415 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
IRX3P78415 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.29■□□□□ 0.68
IRX3P78415 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX3P78415 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX3P78415 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
IRX3P78415 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX3P78415 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX3P78415 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX3P78415 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX3P78415 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 AC022144.1-201ENST00000602255 1580 ntBASIC19.28■□□□□ 0.68
IRX3P78415 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX3P78415 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.28■□□□□ 0.68
IRX3P78415 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX3P78415 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.28■□□□□ 0.68
IRX3P78415 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX3P78415 TSSK5P-201ENST00000423978 907 ntBASIC19.28■□□□□ 0.68
IRX3P78415 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.28■□□□□ 0.68
IRX3P78415 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.28■□□□□ 0.68
IRX3P78415 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX3P78415 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
IRX3P78415 AC004233.3-201ENST00000607794 1269 ntBASIC19.28■□□□□ 0.68
IRX3P78415 AL138828.2-201ENST00000615812 383 ntBASIC19.28■□□□□ 0.68
IRX3P78415 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX3P78415 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
IRX3P78415 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
IRX3P78415 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX3P78415 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX3P78415 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX3P78415 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
IRX3P78415 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
IRX3P78415 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
IRX3P78415 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX3P78415 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX3P78415 PRYP6-201ENST00000514804 343 ntBASIC19.27■□□□□ 0.68
IRX3P78415 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX3P78415 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX3P78415 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX3P78415 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.27■□□□□ 0.68
IRX3P78415 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
IRX3P78415 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX3P78415 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX3P78415 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX3P78415 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX3P78415 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX3P78415 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX3P78415 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
IRX3P78415 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IRX3P78415 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
IRX3P78415 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.27■□□□□ 0.67
IRX3P78415 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms