Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.9■□□□□ 0.14
VSX2P58304 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.9■□□□□ 0.14
VSX2P58304 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 AC016027.1-202ENST00000607927 1699 ntBASIC15.89■□□□□ 0.13
VSX2P58304 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 WASH6P-202ENST00000359512 1437 ntBASIC15.89■□□□□ 0.13
VSX2P58304 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.89■□□□□ 0.13
VSX2P58304 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.89■□□□□ 0.13
VSX2P58304 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.89■□□□□ 0.13
VSX2P58304 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 AC105339.1-204ENST00000636249 355 ntBASIC15.89■□□□□ 0.13
VSX2P58304 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.89■□□□□ 0.13
VSX2P58304 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.89■□□□□ 0.13
VSX2P58304 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
VSX2P58304 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VSX2P58304 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VSX2P58304 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
VSX2P58304 AC106886.4-201ENST00000623557 2502 ntBASIC15.88■□□□□ 0.13
VSX2P58304 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VSX2P58304 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.88■□□□□ 0.13
VSX2P58304 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.88■□□□□ 0.13
VSX2P58304 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
VSX2P58304 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 AC022145.2-201ENST00000598203 171 ntBASIC15.88■□□□□ 0.13
VSX2P58304 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.88■□□□□ 0.13
VSX2P58304 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 AL513210.1-201ENST00000629608 234 ntBASIC15.88■□□□□ 0.13
VSX2P58304 AL139011.1-202ENST00000642063 584 ntBASIC15.88■□□□□ 0.13
VSX2P58304 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VSX2P58304 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.88■□□□□ 0.13
VSX2P58304 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.88■□□□□ 0.13
VSX2P58304 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms