Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PDE1AP54750 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE1AP54750 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE1AP54750 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE1AP54750 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PDE1AP54750 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE1AP54750 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE1AP54750 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE1AP54750 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDE1AP54750 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 MIR574-201ENST00000385209 96 ntBASIC20.21■□□□□ 0.83
PDE1AP54750 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.21■□□□□ 0.83
PDE1AP54750 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.21■□□□□ 0.83
PDE1AP54750 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 AL078644.1-201ENST00000609881 752 ntBASIC20.21■□□□□ 0.83
PDE1AP54750 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 AC016027.1-202ENST00000607927 1699 ntBASIC20.21■□□□□ 0.83
PDE1AP54750 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE1AP54750 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PDE1AP54750 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE1AP54750 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PDE1AP54750 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE1AP54750 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
PDE1AP54750 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 AL022342.1-201ENST00000400363 863 ntBASIC20.2■□□□□ 0.82
PDE1AP54750 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE1AP54750 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.2■□□□□ 0.82
PDE1AP54750 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE1AP54750 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.2■□□□□ 0.82
PDE1AP54750 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.2■□□□□ 0.82
PDE1AP54750 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.2■□□□□ 0.82
PDE1AP54750 AL671883.3-201ENST00000603274 991 ntBASIC20.2■□□□□ 0.82
PDE1AP54750 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE1AP54750 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE1AP54750 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PDE1AP54750 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE1AP54750 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE1AP54750 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.19■□□□□ 0.82
PDE1AP54750 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
PDE1AP54750 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDE1AP54750 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDE1AP54750 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE1AP54750 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms