Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
VEGFBP49765 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.71■□□□□ 0.59
VEGFBP49765 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.71■□□□□ 0.59
VEGFBP49765 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VEGFBP49765 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VEGFBP49765 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.7■□□□□ 0.58
VEGFBP49765 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.7■□□□□ 0.58
VEGFBP49765 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VEGFBP49765 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.7■□□□□ 0.58
VEGFBP49765 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.7■□□□□ 0.58
VEGFBP49765 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 AC069218.1-201ENST00000435269 762 ntBASIC18.7■□□□□ 0.58
VEGFBP49765 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.7■□□□□ 0.58
VEGFBP49765 RPL13P2-201ENST00000440687 659 ntBASIC18.7■□□□□ 0.58
VEGFBP49765 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VEGFBP49765 RPL13AP25-201ENST00000484130 612 ntBASIC18.7■□□□□ 0.58
VEGFBP49765 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.7■□□□□ 0.58
VEGFBP49765 AP001505.2-201ENST00000616815 443 ntBASIC18.7■□□□□ 0.58
VEGFBP49765 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.7■□□□□ 0.58
VEGFBP49765 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
VEGFBP49765 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
VEGFBP49765 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VEGFBP49765 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VEGFBP49765 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.69■□□□□ 0.58
VEGFBP49765 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.69■□□□□ 0.58
VEGFBP49765 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 WIZP1-201ENST00000531444 2299 ntBASIC18.69■□□□□ 0.58
VEGFBP49765 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.69■□□□□ 0.58
VEGFBP49765 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 SLC25A1P3-201ENST00000395415 828 ntBASIC18.69■□□□□ 0.58
VEGFBP49765 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.69■□□□□ 0.58
VEGFBP49765 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.69■□□□□ 0.58
VEGFBP49765 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 PRKXP1-201ENST00000561423 1122 ntBASIC18.69■□□□□ 0.58
VEGFBP49765 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.69■□□□□ 0.58
VEGFBP49765 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
VEGFBP49765 AC079336.7-201ENST00000623428 1078 ntBASIC18.69■□□□□ 0.58
VEGFBP49765 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFBP49765 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFBP49765 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VEGFBP49765 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.68■□□□□ 0.58
VEGFBP49765 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.68■□□□□ 0.58
VEGFBP49765 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.68■□□□□ 0.58
VEGFBP49765 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.68■□□□□ 0.58
VEGFBP49765 AC078819.1-201ENST00000547454 765 ntBASIC18.68■□□□□ 0.58
VEGFBP49765 AC012085.1-201ENST00000548270 765 ntBASIC18.68■□□□□ 0.58
VEGFBP49765 FGFR3P5-201ENST00000564496 886 ntBASIC18.68■□□□□ 0.58
VEGFBP49765 MIR3147-201ENST00000577811 66 ntBASIC18.68■□□□□ 0.58
VEGFBP49765 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.68■□□□□ 0.58
VEGFBP49765 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFBP49765 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms