Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNTAP49354 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.29■□□□□ 0.36
FNTAP49354 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.28■□□□□ 0.36
FNTAP49354 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.28■□□□□ 0.36
FNTAP49354 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.28■□□□□ 0.36
FNTAP49354 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.28■□□□□ 0.36
FNTAP49354 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.28■□□□□ 0.36
FNTAP49354 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.28■□□□□ 0.36
FNTAP49354 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.28■□□□□ 0.36
FNTAP49354 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FNTAP49354 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
FNTAP49354 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.28■□□□□ 0.36
FNTAP49354 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FNTAP49354 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.28■□□□□ 0.36
FNTAP49354 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.28■□□□□ 0.36
FNTAP49354 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
FNTAP49354 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FNTAP49354 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 LINC01144-201ENST00000626198 1710 ntBASIC17.27■□□□□ 0.36
FNTAP49354 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
FNTAP49354 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 PCGF3-213ENST00000620529 1899 ntBASIC17.27■□□□□ 0.36
FNTAP49354 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
FNTAP49354 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FNTAP49354 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
FNTAP49354 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 KRT16P4-201ENST00000453883 522 ntBASIC17.27■□□□□ 0.36
FNTAP49354 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.27■□□□□ 0.36
FNTAP49354 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.27■□□□□ 0.36
FNTAP49354 AL049597.2-201ENST00000565575 961 ntBASIC17.27■□□□□ 0.36
FNTAP49354 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.27■□□□□ 0.36
FNTAP49354 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.27■□□□□ 0.36
FNTAP49354 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FNTAP49354 GPAA1P2-202ENST00000606848 1787 ntBASIC17.27■□□□□ 0.35
FNTAP49354 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.27■□□□□ 0.35
FNTAP49354 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FNTAP49354 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
FNTAP49354 TSPY26P-202ENST00000565928 3884 ntBASIC17.27■□□□□ 0.35
FNTAP49354 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FNTAP49354 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.27■□□□□ 0.35
FNTAP49354 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
FNTAP49354 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
FNTAP49354 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.27■□□□□ 0.35
FNTAP49354 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FNTAP49354 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.27■□□□□ 0.35
FNTAP49354 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FNTAP49354 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.26■□□□□ 0.35
FNTAP49354 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.26■□□□□ 0.35
FNTAP49354 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.26■□□□□ 0.35
FNTAP49354 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FNTAP49354 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.26■□□□□ 0.35
FNTAP49354 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 AC087163.2-201ENST00000457299 853 ntBASIC17.26■□□□□ 0.35
FNTAP49354 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.26■□□□□ 0.35
FNTAP49354 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FNTAP49354 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.26■□□□□ 0.35
FNTAP49354 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
FNTAP49354 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.26■□□□□ 0.35
FNTAP49354 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.26■□□□□ 0.35
FNTAP49354 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.26■□□□□ 0.35
FNTAP49354 AF228730.7-201ENST00000641842 219 ntBASIC17.26■□□□□ 0.35
FNTAP49354 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FNTAP49354 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms