Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 AL031731.1-201ENST00000642131 2094 ntBASIC14.78□□□□□ -0.04
CSNK1A1P48729 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 GGT3P-204ENST00000453783 1664 ntBASIC14.78□□□□□ -0.04
CSNK1A1P48729 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 BCAR1-209ENST00000546196 1340 ntBASIC14.78□□□□□ -0.04
CSNK1A1P48729 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 AC018845.2-201ENST00000568326 409 ntBASIC14.78□□□□□ -0.04
CSNK1A1P48729 AL031055.1-201ENST00000606362 631 ntBASIC14.78□□□□□ -0.04
CSNK1A1P48729 AC027601.4-201ENST00000611259 610 ntBASIC14.78□□□□□ -0.04
CSNK1A1P48729 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSNK1A1P48729 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CSNK1A1P48729 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1A1P48729 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1A1P48729 AC018695.7-201ENST00000624587 2492 ntBASIC14.77□□□□□ -0.04
CSNK1A1P48729 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1A1P48729 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1A1P48729 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.77□□□□□ -0.04
CSNK1A1P48729 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1A1P48729 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CSNK1A1P48729 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
CSNK1A1P48729 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.77□□□□□ -0.04
CSNK1A1P48729 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CSNK1A1P48729 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.77□□□□□ -0.04
CSNK1A1P48729 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CSNK1A1P48729 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CSNK1A1P48729 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1A1P48729 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1A1P48729 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 RNU1-129P-201ENST00000384064 167 ntBASIC14.77□□□□□ -0.05
CSNK1A1P48729 MED15P5-201ENST00000423150 992 ntBASIC14.77□□□□□ -0.05
CSNK1A1P48729 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1A1P48729 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 AL591424.1-201ENST00000442569 1213 ntBASIC14.77□□□□□ -0.05
CSNK1A1P48729 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 RNA5SP416-201ENST00000516838 111 ntBASIC14.77□□□□□ -0.05
CSNK1A1P48729 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 AC106730.1-201ENST00000566722 1090 ntBASIC14.77□□□□□ -0.05
CSNK1A1P48729 U1.21-201ENST00000580816 167 ntBASIC14.77□□□□□ -0.05
CSNK1A1P48729 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1A1P48729 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.77□□□□□ -0.05
CSNK1A1P48729 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1A1P48729 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1A1P48729 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1A1P48729 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms