Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFC1P35251 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFC1P35251 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFC1P35251 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFC1P35251 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.5■□□□□ 0.39
RFC1P35251 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 BX640515.1-201ENST00000617215 977 ntBASIC17.5■□□□□ 0.39
RFC1P35251 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RFC1P35251 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFC1P35251 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RFC1P35251 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RFC1P35251 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.5■□□□□ 0.39
RFC1P35251 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.49■□□□□ 0.39
RFC1P35251 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
RFC1P35251 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.49■□□□□ 0.39
RFC1P35251 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RFC1P35251 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.49■□□□□ 0.39
RFC1P35251 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.49■□□□□ 0.39
RFC1P35251 KRT18P2-201ENST00000447938 1258 ntBASIC17.49■□□□□ 0.39
RFC1P35251 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.49■□□□□ 0.39
RFC1P35251 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.49■□□□□ 0.39
RFC1P35251 SLC25A1P1-201ENST00000528351 927 ntBASIC17.49■□□□□ 0.39
RFC1P35251 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.49■□□□□ 0.39
RFC1P35251 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.49■□□□□ 0.39
RFC1P35251 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RFC1P35251 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RFC1P35251 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFC1P35251 GPAA1P2-202ENST00000606848 1787 ntBASIC17.48■□□□□ 0.39
RFC1P35251 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 AC007967.2-201ENST00000432613 625 ntBASIC17.48■□□□□ 0.39
RFC1P35251 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms