Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.4■□□□□ 0.54
CTGFP29279 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.4■□□□□ 0.54
CTGFP29279 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.4■□□□□ 0.54
CTGFP29279 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 GPAA1P2-201ENST00000417923 928 ntBASIC18.4■□□□□ 0.54
CTGFP29279 AL162726.2-201ENST00000438986 1017 ntBASIC18.4■□□□□ 0.54
CTGFP29279 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.4■□□□□ 0.54
CTGFP29279 AP001889.1-201ENST00000525414 633 ntBASIC18.4■□□□□ 0.54
CTGFP29279 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.4■□□□□ 0.54
CTGFP29279 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CTGFP29279 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.4■□□□□ 0.54
CTGFP29279 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.4■□□□□ 0.54
CTGFP29279 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.4■□□□□ 0.54
CTGFP29279 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.4■□□□□ 0.54
CTGFP29279 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.4■□□□□ 0.54
CTGFP29279 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.4■□□□□ 0.54
CTGFP29279 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CTGFP29279 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.4■□□□□ 0.54
CTGFP29279 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.4■□□□□ 0.54
CTGFP29279 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.4■□□□□ 0.54
CTGFP29279 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.4■□□□□ 0.54
CTGFP29279 AL031731.1-201ENST00000642131 2094 ntBASIC18.4■□□□□ 0.54
CTGFP29279 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 GPAA1P2-202ENST00000606848 1787 ntBASIC18.4■□□□□ 0.54
CTGFP29279 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CTGFP29279 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CTGFP29279 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CTGFP29279 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.39■□□□□ 0.53
CTGFP29279 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.39■□□□□ 0.53
CTGFP29279 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.39■□□□□ 0.53
CTGFP29279 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.39■□□□□ 0.53
CTGFP29279 FAM21FP-201ENST00000426241 1131 ntBASIC18.39■□□□□ 0.53
CTGFP29279 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.39■□□□□ 0.53
CTGFP29279 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.39■□□□□ 0.53
CTGFP29279 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.39■□□□□ 0.53
CTGFP29279 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 AP000812.2-201ENST00000538934 718 ntBASIC18.39■□□□□ 0.53
CTGFP29279 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.39■□□□□ 0.53
CTGFP29279 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.39■□□□□ 0.53
CTGFP29279 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.39■□□□□ 0.53
CTGFP29279 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.39■□□□□ 0.53
CTGFP29279 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.39■□□□□ 0.53
CTGFP29279 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.39■□□□□ 0.53
CTGFP29279 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.39■□□□□ 0.53
CTGFP29279 AC133539.2-201ENST00000604757 467 ntBASIC18.39■□□□□ 0.53
CTGFP29279 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.39■□□□□ 0.53
CTGFP29279 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CTGFP29279 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.39■□□□□ 0.53
CTGFP29279 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTGFP29279 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.39■□□□□ 0.53
CTGFP29279 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 AL645728.1-201ENST00000366221 2101 ntBASIC18.38■□□□□ 0.53
CTGFP29279 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CTGFP29279 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 AL391256.1-201ENST00000443260 1855 ntBASIC18.38■□□□□ 0.53
CTGFP29279 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CTGFP29279 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.38■□□□□ 0.53
CTGFP29279 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTGFP29279 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.38■□□□□ 0.53
CTGFP29279 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.38■□□□□ 0.53
CTGFP29279 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms