Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NCLP19338 AL845331.1-201ENST00000424978 1190 ntBASIC19.84■□□□□ 0.77
NCLP19338 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.84■□□□□ 0.77
NCLP19338 AC104819.1-201ENST00000504587 486 ntBASIC19.84■□□□□ 0.77
NCLP19338 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.84■□□□□ 0.77
NCLP19338 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.84■□□□□ 0.77
NCLP19338 RN7SL510P-201ENST00000581311 263 ntBASIC19.84■□□□□ 0.77
NCLP19338 Z69720.1-201ENST00000601483 472 ntBASIC19.84■□□□□ 0.77
NCLP19338 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.84■□□□□ 0.77
NCLP19338 FRMD8P1-201ENST00000440433 1524 ntBASIC19.84■□□□□ 0.77
NCLP19338 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.84■□□□□ 0.77
NCLP19338 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.84■□□□□ 0.77
NCLP19338 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NCLP19338 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCLP19338 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCLP19338 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.84■□□□□ 0.77
NCLP19338 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
NCLP19338 HLA-A-202ENST00000376806 1854 ntBASIC19.84■□□□□ 0.77
NCLP19338 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.84■□□□□ 0.77
NCLP19338 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCLP19338 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.83■□□□□ 0.77
NCLP19338 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCLP19338 AC009336.1-201ENST00000608941 1553 ntBASIC19.83■□□□□ 0.77
NCLP19338 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCLP19338 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NCLP19338 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCLP19338 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.83■□□□□ 0.77
NCLP19338 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCLP19338 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCLP19338 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.83■□□□□ 0.77
NCLP19338 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.83■□□□□ 0.77
NCLP19338 AC074051.2-201ENST00000565115 352 ntBASIC19.83■□□□□ 0.77
NCLP19338 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCLP19338 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
NCLP19338 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.83■□□□□ 0.77
NCLP19338 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.83■□□□□ 0.77
NCLP19338 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.83■□□□□ 0.77
NCLP19338 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCLP19338 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCLP19338 GPR89P-201ENST00000407924 1495 ntBASIC19.83■□□□□ 0.76
NCLP19338 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCLP19338 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCLP19338 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCLP19338 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
NCLP19338 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
NCLP19338 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC19.82■□□□□ 0.76
NCLP19338 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NCLP19338 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.82■□□□□ 0.76
NCLP19338 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
NCLP19338 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.82■□□□□ 0.76
NCLP19338 KRT17P6-201ENST00000453795 1220 ntBASIC19.82■□□□□ 0.76
NCLP19338 FOSL1P1-201ENST00000511041 816 ntBASIC19.82■□□□□ 0.76
NCLP19338 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.82■□□□□ 0.76
NCLP19338 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NCLP19338 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 AL121772.3-201ENST00000610840 674 ntBASIC19.82■□□□□ 0.76
NCLP19338 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NCLP19338 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.82■□□□□ 0.76
NCLP19338 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCLP19338 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.82■□□□□ 0.76
NCLP19338 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.81■□□□□ 0.76
NCLP19338 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NCLP19338 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLP19338 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
NCLP19338 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NCLP19338 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.81■□□□□ 0.76
NCLP19338 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCLP19338 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NCLP19338 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLP19338 AL353593.2-201ENST00000602529 1483 ntBASIC19.81■□□□□ 0.76
NCLP19338 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCLP19338 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms