Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL3L1P16619 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL3L1P16619 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCL3L1P16619 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL3L1P16619 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCL3L1P16619 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL3L1P16619 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL3L1P16619 BX842568.4-201ENST00000421222 227 ntBASIC13.69□□□□□ -0.22
CCL3L1P16619 MCCD1P2-201ENST00000423228 335 ntBASIC13.69□□□□□ -0.22
CCL3L1P16619 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 ALG1L5P-201ENST00000482043 771 ntBASIC13.69□□□□□ -0.22
CCL3L1P16619 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL3L1P16619 AC112191.1-201ENST00000523689 701 ntBASIC13.69□□□□□ -0.22
CCL3L1P16619 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL3L1P16619 AC109635.5-201ENST00000533593 962 ntBASIC13.69□□□□□ -0.22
CCL3L1P16619 AC092865.5-201ENST00000545435 363 ntBASIC13.69□□□□□ -0.22
CCL3L1P16619 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL3L1P16619 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL3L1P16619 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL3L1P16619 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL3L1P16619 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL3L1P16619 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL3L1P16619 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 GPAA1P2-202ENST00000606848 1787 ntBASIC13.68□□□□□ -0.22
CCL3L1P16619 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL3L1P16619 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL3L1P16619 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CCL3L1P16619 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL3L1P16619 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL3L1P16619 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL3L1P16619 AC002056.1-201ENST00000395613 760 ntBASIC13.68□□□□□ -0.22
CCL3L1P16619 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.68□□□□□ -0.22
CCL3L1P16619 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL3L1P16619 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL3L1P16619 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL3L1P16619 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL3L1P16619 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL3L1P16619 MIR3909-201ENST00000579518 119 ntBASIC13.68□□□□□ -0.22
CCL3L1P16619 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL3L1P16619 AC010327.4-202ENST00000591484 748 ntBASIC13.68□□□□□ -0.22
CCL3L1P16619 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL3L1P16619 MTDHP5-201ENST00000598980 586 ntBASIC13.68□□□□□ -0.22
CCL3L1P16619 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL3L1P16619 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL3L1P16619 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CCL3L1P16619 GGT3P-204ENST00000453783 1664 ntBASIC13.68□□□□□ -0.22
CCL3L1P16619 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CCL3L1P16619 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL3L1P16619 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms