Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 AL353779.1-201ENST00000434793 351 ntBASIC12.25□□□□□ -0.45
NHLRC4P0CG21 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 AP001350.2-201ENST00000625104 1094 ntBASIC12.25□□□□□ -0.45
NHLRC4P0CG21 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 PCDHB17P-201ENST00000539533 2393 ntBASIC12.25□□□□□ -0.45
NHLRC4P0CG21 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NHLRC4P0CG21 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 MRPS18AP1-201ENST00000414458 589 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AC022494.1-201ENST00000466044 728 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 IGHV3-71-201ENST00000523324 359 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 TP53TG3HP-202ENST00000569755 579 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AC008764.6-201ENST00000595909 2069 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AC018529.1-201ENST00000613063 361 ntBASIC12.24□□□□□ -0.45
NHLRC4P0CG21 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NHLRC4P0CG21 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NHLRC4P0CG21 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms