Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 KRT8P48-201ENST00000515599 1220 ntBASIC16.65■□□□□ 0.26
MMP2P08253 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP2P08253 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP2P08253 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP2P08253 AC243562.1-201ENST00000560672 389 ntBASIC16.65■□□□□ 0.26
MMP2P08253 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP2P08253 AC010327.4-202ENST00000591484 748 ntBASIC16.65■□□□□ 0.26
MMP2P08253 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP2P08253 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP2P08253 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP2P08253 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP2P08253 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP2P08253 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP2P08253 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP2P08253 AKAP8P1-201ENST00000434743 1349 ntBASIC16.65■□□□□ 0.26
MMP2P08253 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP2P08253 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP2P08253 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
MMP2P08253 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
MMP2P08253 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
MMP2P08253 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MMP2P08253 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP2P08253 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
MMP2P08253 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP2P08253 DNAJB3-201ENST00000446806 729 ntBASIC16.64■□□□□ 0.25
MMP2P08253 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.64■□□□□ 0.25
MMP2P08253 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP2P08253 AC005829.1-201ENST00000570002 483 ntBASIC16.64■□□□□ 0.25
MMP2P08253 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
MMP2P08253 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP2P08253 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MMP2P08253 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP2P08253 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 ELL2P1-201ENST00000413990 1906 ntBASIC16.64■□□□□ 0.25
MMP2P08253 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP2P08253 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP2P08253 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP2P08253 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP2P08253 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP2P08253 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MMP2P08253 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MMP2P08253 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
MMP2P08253 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
MMP2P08253 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP2P08253 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP2P08253 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP2P08253 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP2P08253 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP2P08253 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP2P08253 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP2P08253 ACTG1P14-201ENST00000446382 1122 ntBASIC16.63■□□□□ 0.25
MMP2P08253 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP2P08253 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP2P08253 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP2P08253 FOXO1B-201ENST00000504678 1527 ntBASIC16.63■□□□□ 0.25
MMP2P08253 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms