Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC005052.1-201ENST00000625181 2492 ntBASIC19.98■□□□□ 0.79
COL4A1P02462 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A1P02462 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL4A1P02462 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A1P02462 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A1P02462 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A1P02462 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.98■□□□□ 0.79
COL4A1P02462 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A1P02462 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A1P02462 AC092171.3-201ENST00000610122 2651 ntBASIC19.98■□□□□ 0.79
COL4A1P02462 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A1P02462 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A1P02462 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A1P02462 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A1P02462 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A1P02462 SERBP1P3-201ENST00000459980 809 ntBASIC19.97■□□□□ 0.79
COL4A1P02462 WFDC1-204ENST00000613603 549 ntBASIC19.97■□□□□ 0.79
COL4A1P02462 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
COL4A1P02462 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL4A1P02462 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A1P02462 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.97■□□□□ 0.79
COL4A1P02462 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.97■□□□□ 0.79
COL4A1P02462 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.97■□□□□ 0.79
COL4A1P02462 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 ANKRD19P-201ENST00000338192 862 ntBASIC19.97■□□□□ 0.79
COL4A1P02462 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A1P02462 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A1P02462 AC099568.2-201ENST00000609194 695 ntBASIC19.97■□□□□ 0.79
COL4A1P02462 MIR8072-201ENST00000614241 80 ntBASIC19.97■□□□□ 0.79
COL4A1P02462 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A1P02462 AC106820.2-201ENST00000563775 3264 ntBASIC19.96■□□□□ 0.79
COL4A1P02462 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL4A1P02462 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A1P02462 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
COL4A1P02462 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.96■□□□□ 0.79
COL4A1P02462 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A1P02462 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL4A1P02462 HLA-V-201ENST00000429037 534 ntBASIC19.96■□□□□ 0.79
COL4A1P02462 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.96■□□□□ 0.79
COL4A1P02462 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.96■□□□□ 0.79
COL4A1P02462 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 AC123567.1-201ENST00000548294 1261 ntBASIC19.96■□□□□ 0.79
COL4A1P02462 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL4A1P02462 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
COL4A1P02462 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A1P02462 AC005622.1-201ENST00000636801 1703 ntBASIC19.96■□□□□ 0.79
COL4A1P02462 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL4A1P02462 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
COL4A1P02462 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL4A1P02462 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
COL4A1P02462 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A1P02462 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.95■□□□□ 0.78
COL4A1P02462 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A1P02462 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A1P02462 AC074338.1-201ENST00000416825 156 ntBASIC19.95■□□□□ 0.78
COL4A1P02462 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.95■□□□□ 0.78
COL4A1P02462 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COL4A1P02462 AC008735.3-201ENST00000596646 500 ntBASIC19.95■□□□□ 0.78
COL4A1P02462 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
COL4A1P02462 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL4A1P02462 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A1P02462 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL4A1P02462 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms