Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.23■□□□□ 0.51
CD4P01730 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.23■□□□□ 0.51
CD4P01730 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.23■□□□□ 0.51
CD4P01730 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CD4P01730 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 AL512384.1-201ENST00000406683 331 ntBASIC18.23■□□□□ 0.51
CD4P01730 AC087499.6-201ENST00000411576 835 ntBASIC18.23■□□□□ 0.51
CD4P01730 AP006294.1-201ENST00000415407 339 ntBASIC18.23■□□□□ 0.51
CD4P01730 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.23■□□□□ 0.51
CD4P01730 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.23■□□□□ 0.51
CD4P01730 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.23■□□□□ 0.51
CD4P01730 AC132938.2-201ENST00000579188 680 ntBASIC18.23■□□□□ 0.51
CD4P01730 CHCHD2P3-201ENST00000603038 451 ntBASIC18.23■□□□□ 0.51
CD4P01730 AL591163.1-201ENST00000641757 987 ntBASIC18.23■□□□□ 0.51
CD4P01730 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CD4P01730 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.23■□□□□ 0.51
CD4P01730 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.23■□□□□ 0.51
CD4P01730 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.23■□□□□ 0.51
CD4P01730 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.23■□□□□ 0.51
CD4P01730 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.22■□□□□ 0.51
CD4P01730 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CD4P01730 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CD4P01730 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CD4P01730 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.22■□□□□ 0.51
CD4P01730 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CD4P01730 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.22■□□□□ 0.51
CD4P01730 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.22■□□□□ 0.51
CD4P01730 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.22■□□□□ 0.51
CD4P01730 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.22■□□□□ 0.51
CD4P01730 AC017083.2-201ENST00000608069 979 ntBASIC18.22■□□□□ 0.51
CD4P01730 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CD4P01730 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.22■□□□□ 0.51
CD4P01730 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CD4P01730 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD4P01730 TUBB8P12-201ENST00000308911 1335 ntBASIC18.22■□□□□ 0.51
CD4P01730 TUBB7P-202ENST00000428444 1305 ntBASIC18.22■□□□□ 0.51
CD4P01730 TUBB8P7-204ENST00000567960 1332 ntBASIC18.22■□□□□ 0.51
CD4P01730 PCDHB18P-201ENST00000524813 2368 ntBASIC18.22■□□□□ 0.51
CD4P01730 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CD4P01730 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CD4P01730 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CD4P01730 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.21■□□□□ 0.51
CD4P01730 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CD4P01730 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CD4P01730 AC139713.2-201ENST00000641328 2723 ntBASIC18.21■□□□□ 0.51
CD4P01730 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CD4P01730 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CD4P01730 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.21■□□□□ 0.51
CD4P01730 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.21■□□□□ 0.51
CD4P01730 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.21■□□□□ 0.51
CD4P01730 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CD4P01730 ACA64.2-201ENST00000459014 129 ntBASIC18.21■□□□□ 0.51
CD4P01730 RN7SL752P-201ENST00000463779 287 ntBASIC18.21■□□□□ 0.51
CD4P01730 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.21■□□□□ 0.51
CD4P01730 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.21■□□□□ 0.51
CD4P01730 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.21■□□□□ 0.51
CD4P01730 AC106886.1-201ENST00000568660 600 ntBASIC18.21■□□□□ 0.51
CD4P01730 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.21■□□□□ 0.51
CD4P01730 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CD4P01730 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CD4P01730 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD4P01730 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CD4P01730 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.2■□□□□ 0.5
CD4P01730 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD4P01730 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.2■□□□□ 0.5
CD4P01730 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms