Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RTN3O95197 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN3O95197 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.5■□□□□ 0.39
RTN3O95197 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.5■□□□□ 0.39
RTN3O95197 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN3O95197 AC016027.1-202ENST00000607927 1699 ntBASIC17.5■□□□□ 0.39
RTN3O95197 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN3O95197 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN3O95197 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTN3O95197 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN3O95197 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN3O95197 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.5■□□□□ 0.39
RTN3O95197 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN3O95197 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN3O95197 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTN3O95197 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTN3O95197 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN3O95197 SPCS2P4-201ENST00000436160 681 ntBASIC17.49■□□□□ 0.39
RTN3O95197 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN3O95197 KRT18P34-201ENST00000488218 1270 ntBASIC17.49■□□□□ 0.39
RTN3O95197 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.49■□□□□ 0.39
RTN3O95197 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN3O95197 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.49■□□□□ 0.39
RTN3O95197 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.49■□□□□ 0.39
RTN3O95197 PCDHA1-201ENST00000378133 2726 ntBASIC17.49■□□□□ 0.39
RTN3O95197 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.49■□□□□ 0.39
RTN3O95197 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN3O95197 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTN3O95197 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN3O95197 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN3O95197 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RTN3O95197 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN3O95197 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN3O95197 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 AP001094.4-201ENST00000579008 2176 ntBASIC17.48■□□□□ 0.39
RTN3O95197 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
RTN3O95197 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN3O95197 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.48■□□□□ 0.39
RTN3O95197 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN3O95197 AC009093.7-201ENST00000623853 1223 ntBASIC17.48■□□□□ 0.39
RTN3O95197 AC008267.7-201ENST00000624570 1194 ntBASIC17.48■□□□□ 0.39
RTN3O95197 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN3O95197 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTN3O95197 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms