Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 MIR769-201ENST00000390225 118 ntBASIC15.91■□□□□ 0.14
GFRA3O60609 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
GFRA3O60609 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.91■□□□□ 0.14
GFRA3O60609 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.91■□□□□ 0.14
GFRA3O60609 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.91■□□□□ 0.14
GFRA3O60609 AC106760.1-201ENST00000508690 800 ntBASIC15.91■□□□□ 0.14
GFRA3O60609 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.91■□□□□ 0.14
GFRA3O60609 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.91■□□□□ 0.14
GFRA3O60609 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.91■□□□□ 0.14
GFRA3O60609 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.91■□□□□ 0.14
GFRA3O60609 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.91■□□□□ 0.14
GFRA3O60609 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.91■□□□□ 0.14
GFRA3O60609 MIR3907-201ENST00000579424 151 ntBASIC15.91■□□□□ 0.14
GFRA3O60609 MIR4741-201ENST00000579822 90 ntBASIC15.91■□□□□ 0.14
GFRA3O60609 RN7SL555P-201ENST00000584742 339 ntBASIC15.91■□□□□ 0.14
GFRA3O60609 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.91■□□□□ 0.14
GFRA3O60609 AL049840.4-201ENST00000602422 811 ntBASIC15.91■□□□□ 0.14
GFRA3O60609 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.91■□□□□ 0.14
GFRA3O60609 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
GFRA3O60609 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.91■□□□□ 0.14
GFRA3O60609 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.91■□□□□ 0.14
GFRA3O60609 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 TNXA-203ENST00000507684 2038 ntBASIC15.9■□□□□ 0.14
GFRA3O60609 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GFRA3O60609 AC069218.1-201ENST00000435269 762 ntBASIC15.9■□□□□ 0.14
GFRA3O60609 MTX1P1-201ENST00000440904 838 ntBASIC15.9■□□□□ 0.14
GFRA3O60609 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
GFRA3O60609 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
GFRA3O60609 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.9■□□□□ 0.14
GFRA3O60609 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.9■□□□□ 0.14
GFRA3O60609 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 AC018635.2-201ENST00000608625 364 ntBASIC15.9■□□□□ 0.14
GFRA3O60609 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.9■□□□□ 0.14
GFRA3O60609 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.9■□□□□ 0.14
GFRA3O60609 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.9■□□□□ 0.14
GFRA3O60609 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.9■□□□□ 0.14
GFRA3O60609 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.9■□□□□ 0.14
GFRA3O60609 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
GFRA3O60609 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GFRA3O60609 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GFRA3O60609 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.89■□□□□ 0.13
GFRA3O60609 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
GFRA3O60609 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.89■□□□□ 0.13
GFRA3O60609 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.89■□□□□ 0.13
GFRA3O60609 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
GFRA3O60609 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
GFRA3O60609 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 AC012441.1-201ENST00000446669 685 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms