Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.91□□□□□ -0.34
PDE6DO43924 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.91□□□□□ -0.34
PDE6DO43924 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.91□□□□□ -0.34
PDE6DO43924 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.91□□□□□ -0.34
PDE6DO43924 AC092666.2-201ENST00000613287 246 ntBASIC12.91□□□□□ -0.34
PDE6DO43924 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.91□□□□□ -0.34
PDE6DO43924 AC073912.3-201ENST00000624414 853 ntBASIC12.91□□□□□ -0.34
PDE6DO43924 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.91□□□□□ -0.34
PDE6DO43924 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PDE6DO43924 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
PDE6DO43924 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.91□□□□□ -0.34
PDE6DO43924 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 AL353692.3-201ENST00000407031 1396 ntBASIC12.91□□□□□ -0.34
PDE6DO43924 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 SSR4P1-203ENST00000599569 2260 ntBASIC12.91□□□□□ -0.34
PDE6DO43924 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.91□□□□□ -0.34
PDE6DO43924 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.91□□□□□ -0.34
PDE6DO43924 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PDE6DO43924 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PDE6DO43924 TMBIM7P-203ENST00000641617 1718 ntBASIC12.91□□□□□ -0.34
PDE6DO43924 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PDE6DO43924 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
PDE6DO43924 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 AC007292.2-201ENST00000593524 1812 ntBASIC12.9□□□□□ -0.34
PDE6DO43924 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
PDE6DO43924 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.9□□□□□ -0.34
PDE6DO43924 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
PDE6DO43924 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 ABHD17AP1-201ENST00000358206 933 ntBASIC12.9□□□□□ -0.34
PDE6DO43924 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 IGHGP-201ENST00000390555 1178 ntBASIC12.9□□□□□ -0.34
PDE6DO43924 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.9□□□□□ -0.34
PDE6DO43924 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.9□□□□□ -0.34
PDE6DO43924 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.9□□□□□ -0.34
PDE6DO43924 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.9□□□□□ -0.34
PDE6DO43924 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.9□□□□□ -0.34
PDE6DO43924 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.9□□□□□ -0.34
PDE6DO43924 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.9□□□□□ -0.34
PDE6DO43924 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
PDE6DO43924 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
PDE6DO43924 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDE6DO43924 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
PDE6DO43924 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
PDE6DO43924 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.9□□□□□ -0.35
PDE6DO43924 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PDE6DO43924 AC016027.1-202ENST00000607927 1699 ntBASIC12.89□□□□□ -0.35
PDE6DO43924 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PDE6DO43924 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.89□□□□□ -0.35
PDE6DO43924 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
PDE6DO43924 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDE6DO43924 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.89□□□□□ -0.35
PDE6DO43924 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.89□□□□□ -0.35
PDE6DO43924 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
PDE6DO43924 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDE6DO43924 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PDE6DO43924 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDE6DO43924 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.89□□□□□ -0.35
PDE6DO43924 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.89□□□□□ -0.35
PDE6DO43924 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.89□□□□□ -0.35
PDE6DO43924 AC069224.1-201ENST00000566372 1715 ntBASIC12.89□□□□□ -0.35
PDE6DO43924 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms