Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.55■□□□□ 0.88
SRGAP3O43295 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.55■□□□□ 0.88
SRGAP3O43295 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.55■□□□□ 0.88
SRGAP3O43295 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
SRGAP3O43295 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SRGAP3O43295 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.54■□□□□ 0.88
SRGAP3O43295 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.54■□□□□ 0.88
SRGAP3O43295 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 AL627223.1-201ENST00000416693 442 ntBASIC20.54■□□□□ 0.88
SRGAP3O43295 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.54■□□□□ 0.88
SRGAP3O43295 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.54■□□□□ 0.88
SRGAP3O43295 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.54■□□□□ 0.88
SRGAP3O43295 PRYP6-201ENST00000514804 343 ntBASIC20.54■□□□□ 0.88
SRGAP3O43295 IGHV3-62-201ENST00000520057 340 ntBASIC20.54■□□□□ 0.88
SRGAP3O43295 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.54■□□□□ 0.88
SRGAP3O43295 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRGAP3O43295 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.54■□□□□ 0.88
SRGAP3O43295 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SRGAP3O43295 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SRGAP3O43295 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.53■□□□□ 0.88
SRGAP3O43295 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.53■□□□□ 0.88
SRGAP3O43295 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SRGAP3O43295 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SRGAP3O43295 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SRGAP3O43295 AC005237.2-201ENST00000434368 219 ntBASIC20.53■□□□□ 0.88
SRGAP3O43295 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.53■□□□□ 0.88
SRGAP3O43295 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.53■□□□□ 0.88
SRGAP3O43295 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.53■□□□□ 0.88
SRGAP3O43295 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
SRGAP3O43295 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.53■□□□□ 0.88
SRGAP3O43295 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.53■□□□□ 0.88
SRGAP3O43295 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.53■□□□□ 0.88
SRGAP3O43295 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.53■□□□□ 0.88
SRGAP3O43295 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.53■□□□□ 0.88
SRGAP3O43295 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.53■□□□□ 0.88
SRGAP3O43295 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
SRGAP3O43295 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 AC084018.2-201ENST00000613093 2607 ntBASIC20.53■□□□□ 0.88
SRGAP3O43295 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.53■□□□□ 0.88
SRGAP3O43295 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRGAP3O43295 OR6D1P-203ENST00000641209 4860 ntBASIC20.53■□□□□ 0.88
SRGAP3O43295 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP3O43295 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP3O43295 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.52■□□□□ 0.88
SRGAP3O43295 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SRGAP3O43295 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.52■□□□□ 0.88
SRGAP3O43295 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP3O43295 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRGAP3O43295 FAM58DP-201ENST00000428076 619 ntBASIC20.52■□□□□ 0.88
SRGAP3O43295 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.52■□□□□ 0.88
SRGAP3O43295 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.52■□□□□ 0.88
SRGAP3O43295 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.52■□□□□ 0.88
SRGAP3O43295 AP000842.3-202ENST00000569238 1080 ntBASIC20.52■□□□□ 0.88
SRGAP3O43295 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.52■□□□□ 0.88
SRGAP3O43295 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.52■□□□□ 0.88
SRGAP3O43295 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms