Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PHF1O43189 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.43□□□□□ -0.1
PHF1O43189 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PHF1O43189 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
PHF1O43189 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.42□□□□□ -0.1
PHF1O43189 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PHF1O43189 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.42□□□□□ -0.1
PHF1O43189 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.42□□□□□ -0.1
PHF1O43189 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.42□□□□□ -0.1
PHF1O43189 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.42□□□□□ -0.1
PHF1O43189 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.42□□□□□ -0.1
PHF1O43189 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.42□□□□□ -0.1
PHF1O43189 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.42□□□□□ -0.1
PHF1O43189 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PHF1O43189 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PHF1O43189 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PHF1O43189 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PHF1O43189 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.42□□□□□ -0.1
PHF1O43189 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PHF1O43189 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.42□□□□□ -0.1
PHF1O43189 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PHF1O43189 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.41□□□□□ -0.1
PHF1O43189 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.41□□□□□ -0.1
PHF1O43189 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
PHF1O43189 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PHF1O43189 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
PHF1O43189 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 ELK2BP-201ENST00000415014 1224 ntBASIC14.41□□□□□ -0.1
PHF1O43189 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.41□□□□□ -0.1
PHF1O43189 KRT18P27-201ENST00000427733 1299 ntBASIC14.41□□□□□ -0.1
PHF1O43189 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.41□□□□□ -0.1
PHF1O43189 AC136632.2-201ENST00000512891 861 ntBASIC14.41□□□□□ -0.1
PHF1O43189 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.41□□□□□ -0.1
PHF1O43189 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.41□□□□□ -0.1
PHF1O43189 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.41□□□□□ -0.1
PHF1O43189 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.41□□□□□ -0.1
PHF1O43189 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 AC005593.1-201ENST00000624894 515 ntBASIC14.41□□□□□ -0.1
PHF1O43189 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.41□□□□□ -0.1
PHF1O43189 AC002310.6-201ENST00000624451 1377 ntBASIC14.41□□□□□ -0.1
PHF1O43189 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.41□□□□□ -0.1
PHF1O43189 AC006504.4-201ENST00000592118 1568 ntBASIC14.41□□□□□ -0.1
PHF1O43189 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.41□□□□□ -0.1
PHF1O43189 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.41□□□□□ -0.1
PHF1O43189 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.41□□□□□ -0.1
PHF1O43189 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 LINC02199-201ENST00000506655 2702 ntBASIC14.41□□□□□ -0.1
PHF1O43189 AC092053.1-201ENST00000605787 1936 ntBASIC14.41□□□□□ -0.1
PHF1O43189 AC093525.9-201ENST00000624961 1746 ntBASIC14.41□□□□□ -0.1
PHF1O43189 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.41□□□□□ -0.1
PHF1O43189 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.41□□□□□ -0.1
PHF1O43189 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PHF1O43189 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms