Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC24.62■■□□□ 1.53
CDC42BPBQ9Y5S2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPBQ9Y5S2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPBQ9Y5S2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC24.62■■□□□ 1.53
CDC42BPBQ9Y5S2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPBQ9Y5S2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPBQ9Y5S2 U82695.1-201ENST00000635752 1889 ntBASIC24.62■■□□□ 1.53
CDC42BPBQ9Y5S2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC24.62■■□□□ 1.53
CDC42BPBQ9Y5S2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 AC036164.1-201ENST00000570544 333 ntBASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 FO393414.2-201ENST00000405153 598 ntBASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 GNRHR2-203ENST00000581100 1187 ntBASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC24.61■■□□□ 1.53
CDC42BPBQ9Y5S2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 MIR1908-201ENST00000410394 80 ntBASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
CDC42BPBQ9Y5S2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 CTBP2P5-201ENST00000454986 1264 ntBASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
CDC42BPBQ9Y5S2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 AC074338.1-201ENST00000416825 156 ntBASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 RN7SL399P-201ENST00000471648 279 ntBASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 ABBA01031660.1-201ENST00000635219 756 ntBASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 AC141586.5-201ENST00000624546 2050 ntBASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPBQ9Y5S2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
CDC42BPBQ9Y5S2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC24.58■■□□□ 1.52
CDC42BPBQ9Y5S2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC24.58■■□□□ 1.52
CDC42BPBQ9Y5S2 RPL13P2-201ENST00000440687 659 ntBASIC24.58■■□□□ 1.52
CDC42BPBQ9Y5S2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC24.58■■□□□ 1.52
CDC42BPBQ9Y5S2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC24.58■■□□□ 1.52
CDC42BPBQ9Y5S2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms