Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 AC003669.1-201ENST00000334569 611 ntBASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 HOMER2P1-201ENST00000455653 964 ntBASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 DUX4L17-201ENST00000557360 1267 ntBASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 AC069148.1-201ENST00000608741 768 ntBASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCDHGB1Q9Y5G3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 AC112504.1-201ENST00000623415 1841 ntBASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB1Q9Y5G3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 AC005332.1-201ENST00000577698 1310 ntBASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms