Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 TFAMP1-201ENST00000412727 736 ntBASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AC211486.1-202ENST00000416371 468 ntBASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AC211476.1-201ENST00000503899 468 ntBASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 GGT3P-204ENST00000453783 1664 ntBASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 KRT8P48-201ENST00000515599 1220 ntBASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 AL135744.1-201ENST00000565098 629 ntBASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 AC026120.1-201ENST00000611536 926 ntBASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 AC134684.3-201ENST00000641758 218 ntBASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 CROCCP1-201ENST00000426910 5675 ntBASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC4Q9Y5F7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms