Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 MIR3615-201ENST00000581999 87 ntBASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 AL022328.1-201ENST00000610050 478 ntBASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 LINC00304-203ENST00000565008 1864 ntBASIC19.91■□□□□ 0.78
ZC3H4Q9UPT8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 SLC25A47P1-201ENST00000531577 414 ntBASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.9■□□□□ 0.78
ZC3H4Q9UPT8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
ZC3H4Q9UPT8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.89■□□□□ 0.78
ZC3H4Q9UPT8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ZC3H4Q9UPT8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ZC3H4Q9UPT8 CDC14C-201ENST00000428251 1719 ntBASIC19.89■□□□□ 0.78
ZC3H4Q9UPT8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ZC3H4Q9UPT8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 ABALON-201ENST00000629058 1903 ntBASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 AC008764.6-201ENST00000595909 2069 ntBASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 AL162726.2-201ENST00000438986 1017 ntBASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 AC024267.1-201ENST00000582320 895 ntBASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.89■□□□□ 0.77
ZC3H4Q9UPT8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 AC099398.1-201ENST00000567919 2776 ntBASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 AC243960.2-201ENST00000600996 747 ntBASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 AC074044.1-201ENST00000609673 707 ntBASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 CLK3P2-201ENST00000427566 1453 ntBASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ZC3H4Q9UPT8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms