Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 SLC25A6P2-201ENST00000497974 877 ntBASIC14.42□□□□□ -0.1
TREM2Q9NZC2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 MTDHP5-201ENST00000598980 586 ntBASIC14.42□□□□□ -0.1
TREM2Q9NZC2 AC010654.1-201ENST00000615722 808 ntBASIC14.42□□□□□ -0.1
TREM2Q9NZC2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 HYMAI-201ENST00000635591 3347 ntBASIC14.42□□□□□ -0.1
TREM2Q9NZC2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TREM2Q9NZC2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 AC092068.3-201ENST00000587894 2016 ntBASIC14.41□□□□□ -0.1
TREM2Q9NZC2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 IGLL3P-201ENST00000412472 434 ntBASIC14.41□□□□□ -0.1
TREM2Q9NZC2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 PRSS29P-201ENST00000440800 595 ntBASIC14.41□□□□□ -0.1
TREM2Q9NZC2 HCG4B-203ENST00000450128 991 ntBASIC14.41□□□□□ -0.1
TREM2Q9NZC2 PAWRP1-201ENST00000451083 565 ntBASIC14.41□□□□□ -0.1
TREM2Q9NZC2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 AC092865.6-201ENST00000642101 219 ntBASIC14.41□□□□□ -0.1
TREM2Q9NZC2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 FRMD8P1-201ENST00000440433 1524 ntBASIC14.41□□□□□ -0.1
TREM2Q9NZC2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.41□□□□□ -0.1
TREM2Q9NZC2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 AC092183.1-201ENST00000469884 875 ntBASIC14.4□□□□□ -0.1
TREM2Q9NZC2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 AL513190.1-201ENST00000621254 727 ntBASIC14.4□□□□□ -0.1
TREM2Q9NZC2 AC010507.1-201ENST00000633895 436 ntBASIC14.4□□□□□ -0.1
TREM2Q9NZC2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
TREM2Q9NZC2 PCDHB17P-201ENST00000539533 2393 ntBASIC14.4□□□□□ -0.1
TREM2Q9NZC2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms