Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 FAM58CP-201ENST00000435741 640 ntBASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 AC093724.1-201ENST00000448659 1027 ntBASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 KRT18P34-201ENST00000488218 1270 ntBASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BLOC1S4Q9NUP1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.39■□□□□ 0.54
BLOC1S4Q9NUP1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.39■□□□□ 0.54
BLOC1S4Q9NUP1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BLOC1S4Q9NUP1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
BLOC1S4Q9NUP1 AC006449.6-201ENST00000612330 2296 ntBASIC18.39■□□□□ 0.54
BLOC1S4Q9NUP1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BLOC1S4Q9NUP1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 AL596087.1-201ENST00000400979 1969 ntBASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 YBX2P1-201ENST00000394192 760 ntBASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 AL161645.1-201ENST00000622716 1255 ntBASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 AC073439.1-201ENST00000624121 1774 ntBASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BLOC1S4Q9NUP1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 AL355306.1-201ENST00000415580 579 ntBASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.38■□□□□ 0.53
BLOC1S4Q9NUP1 ALG1L5P-201ENST00000482043 771 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms