Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 AL596087.1-201ENST00000400979 1969 ntBASIC15.88■□□□□ 0.13
BRF2Q9HAW0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 IGLL3P-201ENST00000412472 434 ntBASIC15.88■□□□□ 0.13
BRF2Q9HAW0 HCG4B-203ENST00000450128 991 ntBASIC15.88■□□□□ 0.13
BRF2Q9HAW0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 AC079328.2-201ENST00000561241 3354 ntBASIC15.88■□□□□ 0.13
BRF2Q9HAW0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRF2Q9HAW0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 AC079776.4-201ENST00000511039 504 ntBASIC15.87■□□□□ 0.13
BRF2Q9HAW0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 AC096734.2-201ENST00000562054 433 ntBASIC15.87■□□□□ 0.13
BRF2Q9HAW0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 HLA-A-201ENST00000376802 1334 ntBASIC15.87■□□□□ 0.13
BRF2Q9HAW0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BRF2Q9HAW0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms