Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PIF1Q9H611 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PIF1Q9H611 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.95■□□□□ 0.14
PIF1Q9H611 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 PMPCAP1-201ENST00000508114 1576 ntBASIC15.95■□□□□ 0.14
PIF1Q9H611 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
PIF1Q9H611 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
PIF1Q9H611 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.95■□□□□ 0.14
PIF1Q9H611 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PIF1Q9H611 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PIF1Q9H611 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.94■□□□□ 0.14
PIF1Q9H611 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PIF1Q9H611 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.94■□□□□ 0.14
PIF1Q9H611 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 LINC00895-201ENST00000629028 1637 ntBASIC15.94■□□□□ 0.14
PIF1Q9H611 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.94■□□□□ 0.14
PIF1Q9H611 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PIF1Q9H611 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PIF1Q9H611 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.94■□□□□ 0.14
PIF1Q9H611 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 RCN1P2-201ENST00000398357 915 ntBASIC15.94■□□□□ 0.14
PIF1Q9H611 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.94■□□□□ 0.14
PIF1Q9H611 AL020989.1-201ENST00000422979 469 ntBASIC15.94■□□□□ 0.14
PIF1Q9H611 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.94■□□□□ 0.14
PIF1Q9H611 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.94■□□□□ 0.14
PIF1Q9H611 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.94■□□□□ 0.14
PIF1Q9H611 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.94■□□□□ 0.14
PIF1Q9H611 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.94■□□□□ 0.14
PIF1Q9H611 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.94■□□□□ 0.14
PIF1Q9H611 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.94■□□□□ 0.14
PIF1Q9H611 AL596087.1-201ENST00000400979 1969 ntBASIC15.94■□□□□ 0.14
PIF1Q9H611 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.94■□□□□ 0.14
PIF1Q9H611 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.94■□□□□ 0.14
PIF1Q9H611 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PIF1Q9H611 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.94■□□□□ 0.14
PIF1Q9H611 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PIF1Q9H611 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.93■□□□□ 0.14
PIF1Q9H611 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.93■□□□□ 0.14
PIF1Q9H611 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 MTHFR-217ENST00000641820 1569 ntBASIC15.93■□□□□ 0.14
PIF1Q9H611 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PIF1Q9H611 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 ACTG1P4-201ENST00000425123 1122 ntBASIC15.93■□□□□ 0.14
PIF1Q9H611 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.93■□□□□ 0.14
PIF1Q9H611 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.93■□□□□ 0.14
PIF1Q9H611 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 INTS4P1-201ENST00000438455 1935 ntBASIC15.93■□□□□ 0.14
PIF1Q9H611 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.93■□□□□ 0.14
PIF1Q9H611 PRAL-201ENST00000624952 3286 ntBASIC15.93■□□□□ 0.14
PIF1Q9H611 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms