Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 FAM58CP-201ENST00000435741 640 ntBASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 DNAJB3-201ENST00000446806 729 ntBASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 AL078644.1-201ENST00000609881 752 ntBASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 ME2P1-201ENST00000426028 1970 ntBASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 WASH6P-202ENST00000359512 1437 ntBASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 YBX2P1-201ENST00000394192 760 ntBASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 KRT18P34-201ENST00000488218 1270 ntBASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AC099522.2-201ENST00000607001 744 ntBASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 C20orf181-201ENST00000623918 480 ntBASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AL118508.1-201ENST00000613502 2345 ntBASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AC016027.1-202ENST00000607927 1699 ntBASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR1EQ9GZS1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 BX842568.4-201ENST00000421222 227 ntBASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 MKNK2P1-201ENST00000437526 628 ntBASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms