Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 AC008608.2-201ENST00000606089 416 ntBASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 TUBB8P12-201ENST00000308911 1335 ntBASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 TUBB7P-202ENST00000428444 1305 ntBASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 TUBB8P7-204ENST00000567960 1332 ntBASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 GPR89P-201ENST00000407924 1495 ntBASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM55Q9BYV6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 AF186996.4-201ENST00000467186 377 ntBASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 AC139530.3-201ENST00000620344 690 ntBASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 AC005052.1-201ENST00000625181 2492 ntBASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM55Q9BYV6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 AC104640.1-201ENST00000562617 2109 ntBASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 RCN1P2-201ENST00000398357 915 ntBASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 AC005336.2-201ENST00000593183 939 ntBASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 AL049840.3-201ENST00000602669 611 ntBASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 AC243591.1-201ENST00000452967 1364 ntBASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 ME2P1-201ENST00000426028 1970 ntBASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM55Q9BYV6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM55Q9BYV6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.83■□□□□ 0.29
TRIM55Q9BYV6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
TRIM55Q9BYV6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TRIM55Q9BYV6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms