Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 MIR662-201ENST00000384847 95 ntBASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 AP002490.2-201ENST00000524791 560 ntBASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 AL603832.2-201ENST00000566195 2125 ntBASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 AC109462.3-201ENST00000573934 613 ntBASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 GPR32P1-201ENST00000601788 811 ntBASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SNORA78-201ENST00000459373 127 ntBASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 AC140113.3-201ENST00000605663 199 ntBASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 FRMD8P1-201ENST00000440433 1524 ntBASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP4Q9BWG4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP4Q9BWG4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms