Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 GPX1P2-201ENST00000429271 606 ntBASIC16.84■□□□□ 0.29
SEMA3CQ99985 AC112191.1-201ENST00000523689 701 ntBASIC16.84■□□□□ 0.29
SEMA3CQ99985 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 AC091812.2-201ENST00000619081 385 ntBASIC16.84■□□□□ 0.29
SEMA3CQ99985 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEMA3CQ99985 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.84■□□□□ 0.29
SEMA3CQ99985 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEMA3CQ99985 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEMA3CQ99985 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEMA3CQ99985 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEMA3CQ99985 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.84■□□□□ 0.29
SEMA3CQ99985 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEMA3CQ99985 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SEMA3CQ99985 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEMA3CQ99985 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEMA3CQ99985 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 FAM58CP-201ENST00000435741 640 ntBASIC16.83■□□□□ 0.28
SEMA3CQ99985 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 MTDHP5-201ENST00000598980 586 ntBASIC16.83■□□□□ 0.28
SEMA3CQ99985 AC005052.1-201ENST00000625181 2492 ntBASIC16.83■□□□□ 0.28
SEMA3CQ99985 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.83■□□□□ 0.28
SEMA3CQ99985 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEMA3CQ99985 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 AL078644.1-201ENST00000609881 752 ntBASIC16.82■□□□□ 0.28
SEMA3CQ99985 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.82■□□□□ 0.28
SEMA3CQ99985 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEMA3CQ99985 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms